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Phylogeny
TNT 
Tree Rendering
TreeDyn |
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Process Info:
Number of taxa: 9
Average sequences length: 7
(between 7 and 7)
Assumed to be: DNA
Computation:
Phylogeny: 0 seconds
Tree Rendering: 1 seconds
Overall time: 1 seconds
Number of taxa: 9
Average sequences length: 7
(between 7 and 7)
Assumed to be: DNA
Computation:
Phylogeny: 0 seconds
Tree Rendering: 1 seconds
Overall time: 1 seconds
The analysis was performed on the Phylogeny.fr platform and comprised the following steps. |
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Phylogeny
TNT 
Outputs: [Newick] [Text] [NEXUS] [ASCII tree] [Logs] Settings: Search: New Technology (Sect. Search, Tree Fusing) Stepmatrix: Disabled Transversion cost: 1 |
The phylogenetic tree was reconstructed using the minimum parsimony method implemented in the TNT program (v1.1). The best tree searching method used was based on "New Technology" involving sectorial search and tree fusing.
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Graphical representation and edition of the phylogenetic tree were performed with TreeDyn (v198.3). |
Please cite:
- Dereeper A., Audic S., Claverie J.M., Blanc G. BLAST-EXPLORER helps you building datasets for phylogenetic analysis. BMC Evol Biol. 2010 Jan 12;10:8. (PubMed)
- Dereeper A.*, Guignon V.*, Blanc G., Audic S., Buffet S., Chevenet F., Dufayard J.F., Guindon S., Lefort V., Lescot M., Claverie J.M., Gascuel O. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W465-9. Epub 2008 Apr 19. (PubMed) *: joint first authors
- Goloboff P., Farris S., Nixon K. TNT (Tree analysis using New Technology) ver. 1.1 2000, Published by the authors, Tucumán, Argentina.
- Chevenet F., Brun C., Banuls AL., Jacq B., Chisten R. TreeDyn: towards dynamic graphics and annotations for analyses of trees. BMC Bioinformatics. 2006, Oct 10;7:439. (PubMed)
