Pairwise methods: Pairwise alignment methods will be used to make a pairwise alignment of all the possible pairs of sequences.
Lalign_pair: 10 best local alignments
Slow_pair: accurate global alignment
Fast_pair: fast heuristic global alignment
Clustalw_pair: ClustalW pairwise alignment Mlalign_id_pair Mclustalw_pair Mfast_pair Mslow_pair

Additional alignment formats:


Print residues number: on off

Output order: input aligned

For a less stringent selection: For a more stringent selection:

Statistical tests for branch support:
Approximate Likelihood-Ratio Test (aLRT):    SH-like Chi2-based parametric Minimum of SH-like and Chi2-based
Bootstrapping procedure:    Number of bootstraps:   

Number of substitution rate categories:
Gamma distribution parameter: estimated     fixed:    
Proportion of invariable sites: estimated     fixed:    
Transition / transversion ratio (nucleic acids only): estimated     fixed:    
Remove gaps from alignment    

Tree can be customized using the dynamic tree editing interface.