A new version of phylogeny.fr is available: https://www.phylogeny.fr/!
TNT 1.1 (doc)
Phylogeny: TNT
Figure 1: Phylogenetic tree (Nelsen strict consensus tree).
Input:
Outputs:
Tree (Nelsen strict consensus) in Newick format (automatically recognized by MEGA if installed) Text output Alignment and trees in Nexus format TNT logsOptimal trees found: 1 trees
Optimal trees (Newick)Taxon names association table
| Output Taxon Name | Original (Long) Taxon Name | |
|---|---|---|
| Australopithecus_africanus | Australopithecus africanus | (TNT) |
| Homo_erectus | Homo erectus | (TNT) |
| Homo_habilis | Homo habilis | (TNT) |
| Homo_heidelbergensis | Homo heidelbergensis | (TNT) |
| Homo_sapiens_neanderthalensis | Homo sapiens neanderthalensis | (TNT) |
| Homo_sapiens_sapiens | Homo sapiens sapiens | (TNT) |
| Pan_troglodytes | Pan troglodytes | (TNT) |
| Paranthropus_Austr_aethiopicus | Paranthropus (Austr.) aethiopicus | (TNT) |
| Paranthropus_Austr_boisei | Paranthropus (Austr.) boisei | (TNT) |
Download taxon names association tableTree viewer:
(requires Java 1.6 or above)
Note: if you want to use these results, you have to agree to TNT Personal Use License (PUL)!
Please cite:
- Dereeper A., Audic S., Claverie J.M., Blanc G. BLAST-EXPLORER helps you building datasets for phylogenetic analysis. BMC Evol Biol. 2010 Jan 12;10:8. (PubMed)
- Dereeper A.*, Guignon V.*, Blanc G., Audic S., Buffet S., Chevenet F., Dufayard J.F., Guindon S., Lefort V., Lescot M., Claverie J.M., Gascuel O. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W465-9. Epub 2008 Apr 19. (PubMed) *: joint first authors
- Goloboff P., Farris S., Nixon K. TNT (Tree analysis using New Technology) ver. 1.1 2000, Published by the authors, Tucumán, Argentina.
